Resolwe

Resolwe module

connect(username=None, password=None, url=None, server_type='resolwe')[source]

Connect to Resolwe server

Parameters

  • username (str) –

  • password (str) –

  • url (str) –

  • server_type (str) – genesis or resolwe

Returns

Instance of GenAPI or ResolweAPI

class GenAPI[source]

Python module that leverages Genesis PyAPI (Python API for accsess to DictyExpress database).

It supports connection to the server and data retrieval functionalities.

download_etc_data(gen_data_id, *args, **kwargs)[source]

Function downloads etc data of a chosen experiment from the server.

Parameters

gen_data_id (str) – id of GeneData object

Return type

data in json like format

fetch_etc_objects(*args, **kwargs)[source]

Function downloads all available GenData etc objects from DictyExpress database.

Return type

list of GenData objects